SHOGoiN Cell Transcriptome: GSM1269167

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269167


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T175Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 193.8816
2 ENSG00000155657 TTN titin 56.5662
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 41.5574
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 38.5082
5 ENSG00000167552 TUBA1A tubulin alpha 1a 27.8177
6 ENSG00000109971 HSPA8 heat shock protein family A (Hsp70) member 8 27.0508
7 ENSG00000075624 ACTB actin beta 26.9321
8 ENSG00000159173 TNNI1 troponin I1, slow skeletal type 23.8327
9 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 22.9973
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 22.4039

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0635
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0635
58733 ENSG00000285992 novel transcript -0.0635
58732 ENSG00000285991 novel transcript -0.0635
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0635
58730 ENSG00000285989 TEC -0.0635
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0635
58728 ENSG00000285987 NA -0.0635
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0635
58726 ENSG00000285985 NA -0.0635

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...