SHOGoiN Cell Transcriptome: GSM1269179

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269179


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T185Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 188.9275
2 ENSG00000167552 TUBA1A tubulin alpha 1a 72.1304
3 ENSG00000155657 TTN titin 47.3672
4 ENSG00000159173 TNNI1 troponin I1, slow skeletal type 29.6993
5 ENSG00000143632 ACTA1 actin, alpha 1, skeletal muscle 28.2576
6 ENSG00000075624 ACTB actin beta 24.7222
7 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 22.2428
8 ENSG00000133055 MYBPH myosin binding protein H 19.5737
9 ENSG00000103994 ZNF106 zinc finger protein 106 18.9554
10 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 18.6799

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0685
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0685
58733 ENSG00000285992 novel transcript -0.0685
58732 ENSG00000285991 novel transcript -0.0685
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0685
58730 ENSG00000285989 TEC -0.0685
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0685
58728 ENSG00000285987 NA -0.0685
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0685
58726 ENSG00000285985 NA -0.0685

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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