SHOGoiN Cell Transcriptome: GSM1269198

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269198


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T203Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 107.2312
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 72.2332
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 69.8218
4 ENSG00000075624 ACTB actin beta 65.8532
5 ENSG00000133110 POSTN periostin 46.8810
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 42.6969
7 ENSG00000182718 ANXA2 annexin A2 41.7627
8 ENSG00000146197 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 39.2314
9 ENSG00000106366 SERPINE1 serpin family E member 1 37.5466
10 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 32.1807

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0944
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0944
58733 ENSG00000285992 novel transcript -0.0944
58732 ENSG00000285991 novel transcript -0.0944
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0944
58730 ENSG00000285989 TEC -0.0944
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0944
58728 ENSG00000285987 NA -0.0944
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0944
58726 ENSG00000285985 NA -0.0944

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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