SHOGoiN Cell Transcriptome: GSM1269199

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269199


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T204Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 155.8143
2 ENSG00000155657 TTN titin 75.0757
3 ENSG00000167552 TUBA1A tubulin alpha 1a 58.8058
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 57.2895
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 50.5754
6 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 47.1665
7 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 35.7454
8 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 23.8225
9 ENSG00000176887 SOX11 SRY-box 11 23.3698
10 ENSG00000127603 MACF1 microtubule-actin crosslinking factor 1 21.6408

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0778
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0778
58733 ENSG00000285992 novel transcript -0.0778
58732 ENSG00000285991 novel transcript -0.0778
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0778
58730 ENSG00000285989 TEC -0.0778
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0778
58728 ENSG00000285987 NA -0.0778
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0778
58726 ENSG00000285985 NA -0.0778

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...