SHOGoiN Cell Transcriptome: GSM1269224

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269224


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T226Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 101.2197
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 83.7153
3 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 60.3782
4 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 47.7957
5 ENSG00000075624 ACTB actin beta 47.0070
6 ENSG00000182718 ANXA2 annexin A2 42.4398
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 39.7130
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 35.5371
9 ENSG00000167552 TUBA1A tubulin alpha 1a 34.6261
10 ENSG00000137801 THBS1 thrombospondin 1 34.3266

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.1013
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.1013
58733 ENSG00000285992 novel transcript -0.1013
58732 ENSG00000285991 novel transcript -0.1013
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.1013
58730 ENSG00000285989 TEC -0.1013
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.1013
58728 ENSG00000285987 NA -0.1013
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.1013
58726 ENSG00000285985 NA -0.1013

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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