SHOGoiN Cell Transcriptome: GSM1269233

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269233


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T232Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 169.6928
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 45.1487
3 ENSG00000075624 ACTB actin beta 44.9010
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 43.1585
5 ENSG00000167552 TUBA1A tubulin alpha 1a 33.6231
6 ENSG00000107796 ACTA2 actin, alpha 2, smooth muscle, aorta 29.3772
7 ENSG00000155657 TTN titin 27.3163
8 ENSG00000123416 TUBA1B tubulin alpha 1b 26.8651
9 ENSG00000258017 novel transcript, antisense to TUBA1B 24.9280
10 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 24.5476

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0870
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0870
58733 ENSG00000285992 novel transcript -0.0870
58732 ENSG00000285991 novel transcript -0.0870
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0870
58730 ENSG00000285989 TEC -0.0870
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0870
58728 ENSG00000285987 NA -0.0870
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0870
58726 ENSG00000285985 NA -0.0870

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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