SHOGoiN Cell Transcriptome: GSM1269236

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269236


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T235Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 126.0326
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 70.5577
3 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 62.1306
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 48.2525
5 ENSG00000087086 FTL ferritin light chain 41.1480
6 ENSG00000075624 ACTB actin beta 40.1655
7 ENSG00000184009 ACTG1 actin gamma 1 37.0479
8 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 36.2023
9 ENSG00000115414 FN1 fibronectin 1 35.0025
10 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 34.0531

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0850
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0850
58733 ENSG00000285992 novel transcript -0.0850
58732 ENSG00000285991 novel transcript -0.0850
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0850
58730 ENSG00000285989 TEC -0.0850
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0850
58728 ENSG00000285987 NA -0.0850
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0850
58726 ENSG00000285985 NA -0.0850

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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