SHOGoiN Cell Transcriptome: GSM1269239

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269239


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T237Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 180.4019
2 ENSG00000167552 TUBA1A tubulin alpha 1a 83.1993
3 ENSG00000159173 TNNI1 troponin I1, slow skeletal type 31.2093
4 ENSG00000124491 F13A1 coagulation factor XIII A chain 25.5408
5 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 24.5793
6 ENSG00000155657 TTN titin 23.8188
7 ENSG00000091527 CDV3 CDV3 homolog 22.6864
8 ENSG00000196230 TUBB tubulin beta class I 20.7684
9 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 20.3044
10 ENSG00000103994 ZNF106 zinc finger protein 106 18.3781

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0648
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0648
58733 ENSG00000285992 novel transcript -0.0648
58732 ENSG00000285991 novel transcript -0.0648
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0648
58730 ENSG00000285989 TEC -0.0648
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0648
58728 ENSG00000285987 NA -0.0648
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0648
58726 ENSG00000285985 NA -0.0648

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...