SHOGoiN Cell Transcriptome: GSM1269293

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269293


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T286Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 162.5091
2 ENSG00000196235 SUPT5H SPT5 homolog, DSIF elongation factor subunit 69.6344
3 ENSG00000115414 FN1 fibronectin 1 46.4157
4 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 46.4157
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 46.4157
6 ENSG00000079459 FDFT1 farnesyl-diphosphate farnesyltransferase 1 23.1970
7 ENSG00000084623 EIF3I eukaryotic translation initiation factor 3 subunit I 23.1970
8 ENSG00000100234 TIMP3 TIMP metallopeptidase inhibitor 3 23.1970
9 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 23.1970
10 ENSG00000109919 MTCH2 mitochondrial carrier 2 23.1970

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0217
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0217
58733 ENSG00000285992 novel transcript -0.0217
58732 ENSG00000285991 novel transcript -0.0217
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0217
58730 ENSG00000285989 TEC -0.0217
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0217
58728 ENSG00000285987 NA -0.0217
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0217
58726 ENSG00000285985 NA -0.0217

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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