SHOGoiN Cell Transcriptome: GSM967514

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


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7020001000000000000000-715Sequence Read ArchiveSRP014428SRP014428_T7Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cellsTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-seqGenome Analyzer IIxSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 80.7495
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 72.9726
3 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 67.9294
4 ENSG00000075624 ACTB actin beta 62.7137
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 58.6204
6 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 52.0856
7 ENSG00000087086 FTL ferritin light chain 50.5339
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 49.8603
9 ENSG00000109971 HSPA8 heat shock protein family A (Hsp70) member 8 38.4230
10 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 35.7132

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.1105
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.1105
58733 ENSG00000285992 novel transcript -0.1105
58732 ENSG00000285991 novel transcript -0.1105
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.1105
58730 ENSG00000285989 TEC -0.1105
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.1105
58728 ENSG00000285987 NA -0.1105
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.1105
58726 ENSG00000285985 NA -0.1105

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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