What is SHOGoiN

SHOGoiN Cell Database is a repository for accumulating and integrating diverse human cell information to support a wide range of cell research at the single-cell resolution. It is a significant extension of the world-first human cell database,CELLPEDIA (Database 2011). compass The database consists of several modules that store cell lineage maps, transcriptome, methylome, cell conversions, cell type markers, cell images with morphology data, and orthologous cells curated from public as well as contracted resources, based on sophisticated cell taxonomy.

What's new

  • Jul-01-2017

    • New SHOGoiN web page opened to public.
    • Database updated. Data in the sections Taxonomy (human and mouse), Transcriptome were added.
  • Jun-01-2017

    • Database updated. Data in the sections Taxonomy (human and mouse), Lineage Map were added.
  • May-01-2017

    • Database updated. Data in the sections Taxonomy (human and mouse), Marker, Transcriptome, Methylome, and Image were added.
  • Feb-01-2017

    • Database updated. Entries in Marker were added.


    

SHOGoiN assay data summary SHOGoiN assay data summary

Cell Lineage Map

Total animals (3)

New Data Selector (under development)

  • Animal
    All
    Human
    Mouse
  • Assay Type
    All
    Transcriptome (6268)
    Methylome (115)
    Cell Conversion (3016)
    Cell Marker (2324)
    Image (1372)
  • Tissue Type
    All
    Brain (2855)
    Early embryonic tissue (1492)
    Pancreas (975)
    Large intestine (957)
    Bone marrow (910)
    Bone (854)
    Eye (736)
    Blood (720)
    Small intestine (573)
    Stomach (563)
    Genitalium (474)
    Heart (461)
      Show more



SHOGoiN standards and Tools