Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell ID: 006

SHOGoiN Cell Taxonomy

Homo sapiens & Mus musculus cell

No.Germ LayerDifferentiation StateSource AgeAnatomy IdCell Type IdAnatomy:body PartAnatomy:organAnatomy:sub-organAnatomy:tissue 1Anatomy:tissue 2Anatomy:tissue 3Anatomy:tissue 4Anatomy:tissue 5-1Anatomy:tissue 5-2Anatomy:tissue 5-3Anatomy:tissue 5-4Cell TypeSynonymCL IdUBERON IdImage IdTissue Image ID
14 Mesodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
8010000000000000000000006Immune system classBloodMacrophageCL:000023551, 137, 171, 311, 312, 313, 625, 626, 627, 659, 660
24 Mesodermal4 Terminally differentiated5 Pharyngula
6 Fetus
8020000000000000000000006Immune system classEmbryonic bloodMacrophageCL:0000235
34 Mesodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
3050000000000000000000006TrunkKidneyMacrophageCL:1000698
44 Mesodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
3090000000000000000000006TrunkLymph nodeLymph node macrophageCL:0000868
54 Mesodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
3090104000000000000000006TrunkLymph nodeCortex of lymph nodeSubcapsular sinusMacrophageCL:0000887
64 Mesodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
3130000000000000000000006TrunkSpleenMacrophageCL:0000872t038
74 Mesodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
3130100000000000000000006TrunkSpleenRed pulpMacrophageCL:0000874
84 Mesodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
3130300000000000000000006TrunkSpleenWhite pulpMacrophageCL:0000872t038, t166, t167
94 Mesodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
3130302000000000000000006TrunkSpleenWhite pulpMarginal zone of spleenMacrophageCL:0000872t038, t166, t167
104 Mesodermal4 Terminally differentiated4 Neurula ~7130300110000000000000006EmbryoDevelopmental gut tubeForegutLiver bud (hepatic diverticulum)MacrophageCL:0000235
114 Mesodermal4 Terminally differentiated4 Neurula ~7270004000100000000000006EmbryoFetomaternal extraembryonic organUmbilical vesicle (yolk sac)Blood islandMacrophageCL:0000235
124 Mesodermal4 Terminally differentiated3 Gastrula ~7270004020000000000000006EmbryoFetomaternal extraembryonic organUmbilical vesicle (yolk sac)Secondary yolk sac (definitive yolk sac)MacrophageCL:0000235

Strongylocentrotus purpuratus cell

No.Germ Layer IdDifferentiation State IdSource Age IdAnatomy IdCell IdAnatomy:level 1Anatomy:level 2Anatomy:level 3Anatomy:level 4-1Anatomy:level 4-2Anatomy:level 5-1Anatomy:level 5-2Anatomy:level 5-3Anatomy:level 6Cell Type
14:Mesodermal4:Terminally differentiated10:Prism1400300006EmbryoPrism-stage larvaBlastcoelSpiculum (Skeletogenic mesenchyme)Bone cell (Osteoblast)
24:Mesodermal4:Terminally differentiated11:Pluteus1460200006EmbryoPluteus-stage larvaArmSpiculum (Skeletogenic mesenchyme)Bone cell (Osteoblast)
34:Mesodermal4:Terminally differentiated11:Pluteus1470300006EmbryoPluteus-stage larvaBlastcoelSpiculum (Skeletogenic mesenchyme)Bone cell (Osteoblast)

SHOGoiN Cell Conversion

Source Cell TypeStem cellStem cellCellCellCellCellStem cellCell
Source Cell NameMesenchymal stem cell Hematopoietic stem cellPrimitive macrophageMacrophagePrimitive macrophageMacrophageDefinitive myeloid progenitor cellMonocyte
Source Cell Type Id734724823006823006861011
Destination Cell TypeCellCellCellCellCellCellCellCell
Destination Cell NameMacrophageMacrophageMacrophageKupffer cellMacrophageKupffer cellMacrophageMacrophage
Destination Cell Type Id006006006168006168006006
Differentiation TypeDifferentiationDifferentiationDifferentiationDifferentiationDifferentiationDifferentiationDifferentiationDifferentiation
Referencehttps://www.yodosha.co.jp/yodobook/book/9784897065816/PMID:21445267PMID:9407545PMID:9407545PMID:9407545PMID:9407545PMID:12510667ISBN:9780878932603