Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell ID: 028

SHOGoiN Cell Taxonomy

Homo sapiens & Mus musculus cell

No.Germ LayerDifferentiation StateSource AgeAnatomy IdCell Type IdAnatomy:body PartAnatomy:organAnatomy:sub-organAnatomy:tissue 1Anatomy:tissue 2Anatomy:tissue 3Anatomy:tissue 4Anatomy:tissue 5-1Anatomy:tissue 5-2Anatomy:tissue 5-3Anatomy:tissue 5-4Cell TypeSynonymCL IdUBERON IdImage IdTissue Image ID
12 Ectodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
1020002010301040000000028HeadEarInner earBony labyrinthMembranous labyrinthCochlear ductStria vascularisBasal cellCL:0002493
22 Ectodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
1030006020301000000000028HeadEyeEyelidTarsal plate of eyelidTarsal gland (Meibomian gland)AcinusBasal cellCL:0000646
32 Ectodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
1040001010000010000000028HeadMouthGingivaOral mucosaEpitheliumBasal cellCL:0000646296, 297, 298, 299
42 Ectodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
1040002010001000000000028HeadMouthHard palateOral mucosaKeratinized stratified squamous epitheliumBasal cellCL:0000646505, 506, 507
52 Ectodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
1040003010100000000000028HeadMouthSoft palateOral mucosaNonkeratinized stratified squamous epitheliumBasal cellCL:0000646496, 497, 498t004
62 Ectodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
1040301000000000000000028HeadMouthTongueTaste budBasal cellCL:0002287t044, t045, t046
72 Ectodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
1050102010001000000000028HeadNoseNasal cavityOlfactory segmentMucosaOlfactory epitheliumBasal cellCL:0002169413t086
82 Ectodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
1050103020001000000000028HeadNoseNasal cavityRespiratory segmentMucosaRespiratory epitheliumBasal cellCL:0000646t085
92 Ectodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
1050200010001000000000028HeadNoseParanasal sinusMucosaRespiratory epitheliumBasal cellCL:0000646
102 Ectodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
2010101000002000000000028NeckPharynxLaryngopharynxMucosaStratified squamous epitheliumBasal cellCL:0000646477, 478, 479
112 Ectodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
2010201000002000000000028NeckPharynxOropharynxMucosaStratified squamous epitheliumBasal cellCL:0000646
122 Ectodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
2010301000002000000000028NeckPharynxNasopharynxMucosaStratified squamous epitheliumBasal cellCL:0000646486, 487
133 Endodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
2020003000100000000000028NeckLarynxMucosaRespiratory epitheliumBasal cellCL:0000646
142 Ectodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
2030001000001010000000028NeckEsophagusMucosaEpitheliumBasal layerBasal cellCL:000064684
152 Ectodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
3010201010300000000000028TrunkBreastNippleSkinDermisSebaceous glandBasal cellCL:0000646
162 Ectodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
3010201020100000000000028TrunkBreastNippleSkinEpidermisStratum basaleBasal cellCL:0002187368t164
174 Mesodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
3080000000000000000000028TrunkLungBasal cellCL:0002329
183 Endodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
3080102010001000000000028TrunkLungBronchial treeBronchioleMucosaEpitheliumBasal cellCL:0002329
193 Endodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
3080104030200000000000028TrunkLungBronchial treeLobar bronchusMucosaRespiratory epitheliumBasal cellCL:0002329
203 Endodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
3080105010200000000000028TrunkLungBronchial treePrimary bronchusMucosaRespiratory epitheliumBasal cellCL:0002329
213 Endodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
3080106010001000000000028TrunkLungBronchial treeRespiratory bronchioleMucosaEpitheliumBasal cellCL:0002329
223 Endodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
3180001000100000000000028TrunkTracheaMucosaRespiratory epitheliumBasal cellCL:0002329t088, t163
234 Mesodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
5050201010100000000000028GenitaliaMale genital ductExtratesticular genital ductEpididymisDuct epididymisEpitheliumBasal cellCL:0000646207, 208, 209t108
244 Mesodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
5060003000000000000000028GenitaliaProstate glandProstatic ductBasal cell
254 Mesodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
5070000000000000000000028GenitaliaSeminal vesicleBasal cellCL:0000646
262 Ectodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
5080005010300000000000028GenitaliaPenisSkinDermisSebaceous glandBasal cellCL:0000646
272 Ectodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
5080005020000000000000028GenitaliaPenisSkinEpidermisBasal cellCL:0002187175, 176, 177
284 Mesodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
6000004010401000000000028UbiquitousSkinDermisReticular layerSebaceous glandBasal cellCL:0000646
292 Ectodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
6000004020101000000000028UbiquitousSkinEpidermisStratified epidermisStratum basaleBasal cellCL:0002187
302 Ectodermal4 Terminally differentiated6 Fetus
7 Postnatal
8 Neonatal
9 Infant
10 Juvenile
11 Adult
7100001000100000000000028EmbryoSkinEpidermisBasal cell
314 Mesodermal4 Terminally differentiated6 Fetus ~7150400010000000000000028EmbryoDevelopmental lungAlveolarRespiratory bronchioleBasal cellCL:0002329

Strongylocentrotus purpuratus cell

No.Germ Layer IdDifferentiation State IdSource Age IdAnatomy IdCell IdAnatomy:level 1Anatomy:level 2Anatomy:level 3Anatomy:level 4-1Anatomy:level 4-2Anatomy:level 5-1Anatomy:level 5-2Anatomy:level 5-3Anatomy:level 6Cell Type
14:Mesodermal3:Multipotent/Progenitor/Precursor11:Pluteus1470100028EmbryoPluteus-stage larvaBlastcoelSkeletogenic mesenchymeSkeletogenic cell

SHOGoiN Cell Conversion

Source Cell TypeStem cellStem cellStem cellStem cellStem cellCellStem cellCellStem cellCellCell
Source Cell NameRespiratory stem cellNose stem cellInterfollicular epidermis stem cellMesenchymal stem cell Multipotent lung progenitor cellNon-neuroendocrine cellTrachea progenitor cellBasal cellSurface ectoderm cellBasal cellBasal cell
Source Cell Type Id759746726734828302829028842028028
Destination Cell TypeCellCellCellCellCellCellCellCellCellCellCell
Destination Cell NameBasal cellBasal cellBasal cellBasal cellBasal cellBasal cellBasal cellClara cellBasal cellPrickle cellIntermediate keratinocyte
Destination Cell Type Id028028028028028028028059028214305
Differentiation TypeDifferentiationDifferentiationDifferentiationDifferentiationDifferentiationDifferentiationDifferentiationDifferentiationDifferentiationDifferentiationDifferentiation
ReferenceNLM ID:101123563NLM ID:101123563https://www.yodosha.co.jp/yodobook/book/9784897065816/https://www.yodosha.co.jp/yodobook/book/9784897065816/PMID:22922672PMID:20152174PMID:20152174PMID:20152174PMID:14757276PMID:14757276PMID:14757276