Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1015969

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1015969


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3070000080000000000000-144Sequence Read ArchiveSRP016010SRP016010_M1Single-cell DNA methylation analysis of epimutations in mouse liver cells.MethylomeHepatocyteMouseLiverBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000018995 Nars2 asparaginyl-tRNA synthetase 2 (mitochondrial)(putative) 6.6582 0.0000
2 ENSMUSG00000100027 Gm28477 predicted gene 28477 5.9069 0.0000
3 ENSMUSG00000038594 Cep85l centrosomal protein 85-like 5.6147 0.0000
4 ENSMUSG00000028792 Ak2 adenylate kinase 2 4.7004 0.0000
5 ENSMUSG00000022803 Popdc2 popeye domain containing 2 4.6084 0.0000
7 ENSMUSG00000082652 Gm14725 predicted gene 14725 4.4594 0.0000
8 ENSMUSG00000027438 Napb N-ethylmaleimide sensitive fusion protein attachment protein beta 4.3219 0.0000
9 ENSMUSG00000105151 Gm43241 predicted gene 43241 4.2479 0.0000
10 ENSMUSG00000107681 4930528H21Rik RIKEN cDNA 4930528H21 gene 4.2479 0.0000
50591 ENSMUSG00000029804 Herc3 hect domain and RLD 3 -1.5000 0.1250

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000000982 Ccl3 chemokine (C-C motif) ligand 3 -1.5850 0.5000
50599 ENSMUSG00000023106 Denr density-regulated protein -1.5566 0.0004
50598 ENSMUSG00000025092 Hspa12a heat shock protein 12A -1.5224 0.0000
50597 ENSMUSG00000051499 Zfp786 zinc finger protein 786 -1.5118 0.0000
50596 ENSMUSG00000099183 Gm27881 predicted gene, 27881 -1.5000 0.1250
50595 ENSMUSG00000068037 Mas1 MAS1 oncogene -1.5000 0.1250
50594 ENSMUSG00000061082 Plac1 placental specific protein 1 -1.5000 0.1250
50593 ENSMUSG00000055430 Nap1l5 nucleosome assembly protein 1-like 5 -1.5000 0.1250
50592 ENSMUSG00000047361 Gm973 predicted gene 973 -1.5000 0.1250
50591 ENSMUSG00000029804 Herc3 hect domain and RLD 3 -1.5000 0.1250

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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