Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1015970

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1015970


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3070000080000000000000-144Sequence Read ArchiveSRP016010SRP016010_M2Single-cell DNA methylation analysis of epimutations in mouse liver cells.MethylomeHepatocyteMouseLiverBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000022951 Rcan1 regulator of calcineurin 1 10.6147 0.0000
2 ENSMUSG00000031201 Brcc3 BRCA1/BRCA2-containing complex, subunit 3 6.7814 0.0000
3 ENSMUSG00000069785 Gm11444 predicted gene 11444 6.7279 0.0000
4 ENSMUSG00000026278 Bok BCL2-related ovarian killer 6.6273 0.0000
5 ENSMUSG00000001349 Cnn1 calponin 1 6.2738 0.0000
6 ENSMUSG00000103194 Gm37643 predicted gene, 37643 6.2577 0.0000
7 ENSMUSG00000098137 Gm33962 predicted gene, 33962 6.1085 0.0000
8 ENSMUSG00000039989 Cbx4 chromobox 4 6.0444 0.0000
10 ENSMUSG00000062105 Olfr183 olfactory receptor 183 5.8071 0.0000
50591 ENSMUSG00000109603 Gm32389 predicted gene, 32389 -1.0000 0.4068

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000110084 Gm45257 predicted gene 45257 -1.0000 0.4068
50599 ENSMUSG00000110071 Gm45512 predicted gene 45512 -1.0000 0.1654
50598 ENSMUSG00000109958 Gm32786 predicted gene, 32786 -1.0000 0.4068
50597 ENSMUSG00000109954 Gm45371 predicted gene 45371 -1.0000 0.1654
50596 ENSMUSG00000109867 Gm5338 predicted gene 5338 -1.0000 0.4068
50595 ENSMUSG00000109847 Gm45278 predicted gene 45278 -1.0000 0.4068
50594 ENSMUSG00000109815 Gm7082 predicted gene 7082 -1.0000 0.4068
50593 ENSMUSG00000109768 Gm45446 predicted gene 45446 -1.0000 0.4068
50592 ENSMUSG00000109618 Gm45527 predicted gene 45527 -1.0000 0.4068
50591 ENSMUSG00000109603 Gm32389 predicted gene, 32389 -1.0000 0.4068

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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