Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1147592

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147592


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5030203000000000000000-761Sequence Read ArchiveSRP023116SRP023116_M9Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeMetaphase II oocyteMouseGenitaliaBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000074378 Bsph1 binder of sperm protein homolog 1 8.4890 0.0000
3 ENSMUSG00000110548 Gm45721 predicted gene 45721 7.5546 0.0000
4 ENSMUSG00000004667 Polr2e polymerase (RNA) II (DNA directed) polypeptide E 7.5328 0.0000
5 ENSMUSG00000103920 Gm37897 predicted gene, 37897 7.5157 0.0000
6 ENSMUSG00000053399 Adamts18 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18 7.4468 0.0000
7 ENSMUSG00000109501 Gm14377 predicted gene 14377 7.3923 0.0000
8 ENSMUSG00000110471 Gm45823 predicted gene 45823 7.3576 0.0000
9 ENSMUSG00000111539 Gm48372 predicted gene, 48372 7.3106 0.0000
10 ENSMUSG00000047654 Tssk6 testis-specific serine kinase 6 7.3083 0.0000
50591 ENSMUSG00000036403 Cep135 centrosomal protein 135 -6.3771 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000062590 Armc9 armadillo repeat containing 9 -6.3936 0.0000
50599 ENSMUSG00000014195 Dnajc7 DnaJ heat shock protein family (Hsp40) member C7 -6.3923 0.0000
50598 ENSMUSG00000006782 Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase -6.3923 0.0000
50597 ENSMUSG00000021481 Zfp346 zinc finger protein 346 -6.3870 0.0000
50596 ENSMUSG00000055976 Cldn23 claudin 23 -6.3829 0.0000
50595 ENSMUSG00000076127 Mir718 microRNA 718 -6.3807 0.0000
50594 ENSMUSG00000031392 Irak1 interleukin-1 receptor-associated kinase 1 -6.3807 0.0000
50593 ENSMUSG00000040339 Fam102b family with sequence similarity 102, member B -6.3805 0.0000
50592 ENSMUSG00000025156 Gps1 G protein pathway suppressor 1 -6.3797 0.0000
50591 ENSMUSG00000036403 Cep135 centrosomal protein 135 -6.3771 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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