Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1147597

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147597


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5090101000001000000000-236Sequence Read ArchiveSRP023116SRP023116_M14Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeSpermMouseGenitaliaBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000084274 Gm12504 predicted pseudogene 12504 7.9307 0.0000
2 ENSMUSG00000038608 Dock10 dedicator of cytokinesis 10 7.8455 0.0000
3 ENSMUSG00000103192 Gm37645 predicted gene, 37645 7.8455 0.0000
4 ENSMUSG00000020216 Jsrp1 junctional sarcoplasmic reticulum protein 1 7.8237 0.0000
5 ENSMUSG00000024738 Pga5 pepsinogen 5, group I 7.8009 0.0000
6 ENSMUSG00000109453 4930405G09Rik RIKEN cDNA 4930405G09 gene 7.7616 0.0000
7 ENSMUSG00000108849 Gm35147 predicted gene, 35147 7.5673 0.0000
8 ENSMUSG00000105032 Gm43117 predicted gene 43117 7.5275 0.0000
9 ENSMUSG00000043782 Bicdl2 BICD family like cargo adaptor 2 7.4757 0.0000
10 ENSMUSG00000027380 Acoxl acyl-Coenzyme A oxidase-like 7.3750 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000022914 Brwd1 bromodomain and WD repeat domain containing 1 -6.5519 0.0000
50599 ENSMUSG00000083143 Gm13424 predicted gene 13424 -6.5517 0.0000
50598 ENSMUSG00000030678 Maz MYC-associated zinc finger protein (purine-binding transcription factor) -6.5497 0.0000
50597 ENSMUSG00000019189 Rnf145 ring finger protein 145 -6.5490 0.0000
50596 ENSMUSG00000035946 Gsx2 GS homeobox 2 -6.5446 0.0000
50595 ENSMUSG00000050272 Dscam DS cell adhesion molecule -6.5438 0.0000
50594 ENSMUSG00000074227 Spint2 serine protease inhibitor, Kunitz type 2 -6.5437 0.0000
50593 ENSMUSG00000037166 Ppp1r14a protein phosphatase 1, regulatory inhibitor subunit 14A -6.5437 0.0000
50592 ENSMUSG00000079480 Pin4 protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) -6.5392 0.0000
50591 ENSMUSG00000016494 Cd34 CD34 antigen -6.5353 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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