Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1147598

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147598


Profile download
5090101000001000000000-236Sequence Read ArchiveSRP023116SRP023116_M15Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeSpermMouseGenitaliaBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000091336 Gm17157 predicted gene 17157 8.0334 0.0000
2 ENSMUSG00000095762 Gm16378 predicted gene 16378 7.3436 0.0000
3 ENSMUSG00000110525 Gm45893 predicted gene 45893 7.3399 0.0000
4 ENSMUSG00000098502 Gm27511 predicted gene, 27511 7.3129 0.0000
5 ENSMUSG00000096753 Fam181a family with sequence similarity 181, member A 7.1497 0.0000
6 ENSMUSG00000100789 Gm29508 predicted gene 29508 7.1497 0.0000
7 ENSMUSG00000045267 Tas2r119 taste receptor, type 2, member 119 6.8703 0.0000
8 ENSMUSG00000005763 Cd247 CD247 antigen 6.7944 0.0000
9 ENSMUSG00000104801 Gm43834 predicted gene 43834 6.7631 0.0000
10 ENSMUSG00000106670 Gm44347 predicted gene, 44347 6.7549 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000078492 1700045H11Rik RIKEN cDNA 1700045H11 gene -6.0000 0.0000
50599 ENSMUSG00000018770 Atp5g3 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) -6.0000 0.0000
50598 ENSMUSG00000041716 Gm20604 predicted gene 20604 -5.9989 0.0000
50597 ENSMUSG00000018199 Ro60 Ro60, Y RNA binding protein -5.9978 0.0000
50596 ENSMUSG00000108783 Gm36546 predicted gene, 36546 -5.9976 0.0000
50595 ENSMUSG00000038888 Ctu1 cytosolic thiouridylase subunit 1 -5.9976 0.0000
50594 ENSMUSG00000033278 Ptprm protein tyrosine phosphatase, receptor type, M -5.9972 0.0000
50593 ENSMUSG00000032215 Rsl24d1 ribosomal L24 domain containing 1 -5.9960 0.0000
50592 ENSMUSG00000105945 Gm43570 predicted gene 43570 -5.9953 0.0000
50591 ENSMUSG00000034663 Bmp2k BMP2 inducible kinase -5.9950 0.0469

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...