Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1147600

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147600


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5090101000001000000000-236Sequence Read ArchiveSRP023116SRP023116_M17Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeSpermMouseGenitaliaBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000108581 Gm44896 predicted gene 44896 8.3004 0.0000
2 ENSMUSG00000015365 Mov10l1 Mov10 like RISC complex RNA helicase 1 8.1687 0.0000
3 ENSMUSG00000073980 Gm9574 predicted gene 9574 7.9658 0.0000
4 ENSMUSG00000093419 Gm19898 predicted gene, 19898 7.9523 0.0000
5 ENSMUSG00000108506 Gm44705 predicted gene 44705 7.8826 0.0000
6 ENSMUSG00000105717 Gm43465 predicted gene 43465 7.8642 0.0000
7 ENSMUSG00000026100 Mstn myostatin 7.6653 0.0000
8 ENSMUSG00000092818 Gm27361 predicted gene, 27361 7.6414 0.0000
9 ENSMUSG00000042129 Rassf4 Ras association (RalGDS/AF-6) domain family member 4 7.6221 0.0000
10 ENSMUSG00000042064 Myo3b myosin IIIB 7.6055 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000041168 Lonp1 lon peptidase 1, mitochondrial -6.3378 0.0000
50599 ENSMUSG00000040828 Catsperd cation channel sperm associated auxiliary subunit delta -6.3378 0.0000
50598 ENSMUSG00000082319 Actr3-ps actin related protein 3, pseudogene -6.3359 0.0000
50597 ENSMUSG00000040325 Dcaf1 DDB1 and CUL4 associated factor 1 -6.3355 0.0000
50596 ENSMUSG00000048458 Inka2 inka box actin regulator 2 -6.3279 0.0000
50595 ENSMUSG00000032446 Eomes eomesodermin -6.3245 0.0000
50594 ENSMUSG00000110582 Gm30052 predicted gene, 30052 -6.3219 0.0000
50593 ENSMUSG00000028480 Glipr2 GLI pathogenesis-related 2 -6.3219 0.0000
50592 ENSMUSG00000020038 Cry1 cryptochrome 1 (photolyase-like) -6.3189 0.0000
50591 ENSMUSG00000037999 Arap2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 -6.3183 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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