Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1147605

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147605


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7010000000000000000000-769Sequence Read ArchiveSRP023116SRP023116_M22Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeMale pronucleus (Zygote)MouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000087823 Gm22281 predicted gene, 22281 6.9542 0.0000
2 ENSMUSG00000107728 Gm38910 predicted gene, 38910 6.7279 0.0000
3 ENSMUSG00000109602 Gm31597 predicted gene, 31597 6.6147 0.0000
4 ENSMUSG00000105087 Gm42552 predicted gene 42552 6.5660 0.0000
5 ENSMUSG00000089709 Gm16262 predicted gene 16262 6.4919 0.0000
6 ENSMUSG00000111575 Gm47926 predicted gene, 47926 6.4429 0.0000
7 ENSMUSG00000081605 Gm15953 predicted gene 15953 6.4263 0.0000
8 ENSMUSG00000103435 Gm36992 predicted gene, 36992 6.3038 0.0000
9 ENSMUSG00000104154 Gm38104 predicted gene, 38104 6.3038 0.0000
10 ENSMUSG00000009487 Otog otogelin 6.0224 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000021732 Fgf10 fibroblast growth factor 10 -5.2697 0.0000
50599 ENSMUSG00000093732 Gm20609 predicted gene 20609 -5.2667 0.0788
50598 ENSMUSG00000102112 1810041H14Rik RIKEN cDNA 1810041H14 gene -5.2657 0.0000
50597 ENSMUSG00000036087 Slain2 SLAIN motif family, member 2 -5.2625 0.0000
50596 ENSMUSG00000020694 Tlk2 tousled-like kinase 2 (Arabidopsis) -5.2564 0.0000
50595 ENSMUSG00000035877 Zhx3 zinc fingers and homeoboxes 3 -5.2558 0.0000
50594 ENSMUSG00000029404 Arl6ip4 ADP-ribosylation factor-like 6 interacting protein 4 -5.2549 0.0009
50593 ENSMUSG00000020143 Dock2 dedicator of cyto-kinesis 2 -5.2516 0.0000
50592 ENSMUSG00000033014 Trim33 tripartite motif-containing 33 -5.2491 0.0000
50591 ENSMUSG00000106818 Gm43790 predicted gene 43790 -5.2479 0.0159

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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