Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1147608

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147608


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7010000000000000000000-769Sequence Read ArchiveSRP023116SRP023116_M25Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeFemale pronucleus (Zygote)MouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000098516 Mir7651 microRNA 7651 7.2798 0.0000
2 ENSMUSG00000085025 Gm13715 predicted gene 13715 7.2479 0.0000
3 ENSMUSG00000010797 Wnt2 wingless-type MMTV integration site family, member 2 7.1204 0.0000
4 ENSMUSG00000033955 Tnks1bp1 tankyrase 1 binding protein 1 7.0625 0.0000
5 ENSMUSG00000096992 Gm26788 predicted gene, 26788 7.0381 0.0000
6 ENSMUSG00000068324 Gm10029 predicted gene 10029 6.9658 0.0000
7 ENSMUSG00000067835 Gm14661 predicted gene 14661 6.9410 0.0000
8 ENSMUSG00000064558 Gm24620 predicted gene, 24620 6.8948 0.0000
9 ENSMUSG00000084052 Gm11745 predicted gene 11745 6.8291 0.0000
10 ENSMUSG00000041794 Myrip myosin VIIA and Rab interacting protein 6.5545 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000086414 Gm15645 predicted gene 15645 -5.8089 0.0000
50599 ENSMUSG00000112652 4921516A02Rik RIKEN cDNA 4921516A02 gene -5.8074 0.0001
50598 ENSMUSG00000104793 Gm43756 predicted gene 43756 -5.8074 0.0000
50597 ENSMUSG00000098932 Mir6410 microRNA 6410 -5.8074 0.0001
50596 ENSMUSG00000086733 Gm11685 predicted gene 11685 -5.8074 0.0137
50595 ENSMUSG00000041895 Wipi1 WD repeat domain, phosphoinositide interacting 1 -5.8074 0.0137
50594 ENSMUSG00000021679 S100z S100 calcium binding protein, zeta -5.8074 0.0001
50593 ENSMUSG00000019853 Hebp2 heme binding protein 2 -5.8074 0.0000
50592 ENSMUSG00000029253 Cenpc1 centromere protein C1 -5.8045 0.0000
50591 ENSMUSG00000055102 Zfp819 zinc finger protein 819 -5.8041 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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