Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1370522

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370522


Profile download
5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M1Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000105290 Gm43528 predicted gene 43528 4.1699 0.0000
2 ENSMUSG00000078656 Vps25 vacuolar protein sorting 25 2.5850 0.0000
3 ENSMUSG00000082994 Gm11848 predicted gene 11848 2.5850 0.0001
4 ENSMUSG00000084246 Gm15162 predicted gene 15162 2.5850 0.0000
5 ENSMUSG00000109354 Olfr706 olfactory receptor 706 2.5850 0.0001
6 ENSMUSG00000043308 Vmn1r75 vomeronasal 1 receptor 75 2.3219 0.0000
7 ENSMUSG00000053678 Defb40 defensin beta 40 2.3219 0.0006
8 ENSMUSG00000082520 Gm13349 predicted gene 13349 2.3219 0.0000
9 ENSMUSG00000085533 Gm12146 predicted gene 12146 2.3219 0.0006
10 ENSMUSG00000094820 Gm23805 predicted gene, 23805 2.3219 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000111772 Olfr228 olfactory receptor 228 -1.5850 1.0000
50599 ENSMUSG00000111716 Gm48554 predicted gene, 48554 -1.5850 1.0000
50598 ENSMUSG00000111577 Gm47136 predicted gene, 47136 -1.5850 1.0000
50597 ENSMUSG00000111561 Gm47957 predicted gene, 47957 -1.5850 0.1475
50596 ENSMUSG00000111518 Olfr1073-ps1 olfactory receptor 1073, pseudogene 1 -1.5850 1.0000
50595 ENSMUSG00000111512 Gm17853 predicted gene, 17853 -1.5850 0.1475
50594 ENSMUSG00000111441 Gm47137 predicted gene, 47137 -1.5850 1.0000
50593 ENSMUSG00000111416 Gm48331 predicted gene, 48331 -1.5850 1.0000
50592 ENSMUSG00000111306 Olfr1065 olfactory receptor 1065 -1.5850 1.0000
50591 ENSMUSG00000111276 Gm47778 predicted gene, 47778 -1.5850 1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...