Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1370523

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370523


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M2Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000063656 Gm10135 predicted gene 10135 2.8774 0.0000
2 ENSMUSG00000088268 Gm24776 predicted gene, 24776 2.8774 0.0000
3 ENSMUSG00000103912 Gm33819 predicted gene, 33819 2.8074 0.0000
4 ENSMUSG00000110865 Gm47046 predicted gene, 47046 2.8074 0.0000
5 ENSMUSG00000042938 Gm14117 predicted gene 14117 2.6455 0.0000
6 ENSMUSG00000081439 Gm7840 predicted gene 7840 2.6055 0.0000
7 ENSMUSG00000060701 Fpr-rs3 formyl peptide receptor, related sequence 3 2.5850 0.0000
8 ENSMUSG00000064477 Gm23404 predicted gene, 23404 2.5850 0.0001
9 ENSMUSG00000074284 Gm10658 predicted gene 10658 2.5850 0.0001
10 ENSMUSG00000075107 Olfr1216 olfactory receptor 1216 2.5850 0.0001

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000108628 Gm5037 predicted gene 5037 -1.9916 0.0008
50599 ENSMUSG00000094872 Igkv9-120 immunoglobulin kappa chain variable 9-120 -1.9914 0.2374
50598 ENSMUSG00000093934 Olfr971 olfactory receptor 971 -1.9914 0.2374
50597 ENSMUSG00000110014 Gm5361 predicted gene 5361 -1.9897 0.0257
50596 ENSMUSG00000003039 Fam32a family with sequence similarity 32, member A -1.9897 0.0265
50595 ENSMUSG00000100954 Gm10138 predicted gene 10138 -1.9895 0.0000
50594 ENSMUSG00000015002 Efr3a EFR3 homolog A -1.9895 0.0000
50593 ENSMUSG00000076530 Igkv11-106 immunoglobulin kappa variable 11-106 -1.9893 0.0397
50592 ENSMUSG00000030942 Thumpd1 THUMP domain containing 1 -1.9885 0.0000
50591 ENSMUSG00000044518 Foxe3 forkhead box E3 -1.9885 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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