Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1370531

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370531


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M10Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000109100 Olfr1464-ps1 olfactory receptor 1464, pseudogene 1 2.5850 0.0000
2 ENSMUSG00000040370 Etfrf1 electron transfer flavoprotein regulatory factor 1 2.4534 0.0000
3 ENSMUSG00000025666 Tmem47 transmembrane protein 47 2.3219 0.0005
4 ENSMUSG00000084899 Gm15344 predicted gene 15344 2.3219 0.0005
5 ENSMUSG00000087224 Gm2182 predicted gene 2182 2.3219 0.0005
6 ENSMUSG00000091283 Gm17234 predicted gene 17234 2.3219 0.0000
7 ENSMUSG00000096535 Gm24755 predicted gene, 24755 2.3219 0.0005
8 ENSMUSG00000102525 Gm37784 predicted gene, 37784 2.3219 0.0005
9 ENSMUSG00000107613 Gm43927 predicted gene, 43927 2.3219 0.0005
10 ENSMUSG00000082687 Gm11474 predicted gene 11474 2.2154 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000102450 Gm38343 predicted gene, 38343 -1.5850 0.6136
50599 ENSMUSG00000102403 Gm38187 predicted gene, 38187 -1.5850 1.0000
50598 ENSMUSG00000102388 Gm33815 predicted gene, 33815 -1.5850 1.0000
50597 ENSMUSG00000102250 Gm38260 predicted gene, 38260 -1.5850 1.0000
50596 ENSMUSG00000101965 Gm29129 predicted gene 29129 -1.5850 1.0000
50595 ENSMUSG00000101802 Gm29445 predicted gene 29445 -1.5850 1.0000
50594 ENSMUSG00000101564 Gm5703 predicted gene 5703 -1.5850 1.0000
50593 ENSMUSG00000101516 Gm29074 predicted gene 29074 -1.5850 1.0000
50592 ENSMUSG00000101425 Gm29255 predicted gene 29255 -1.5850 1.0000
50591 ENSMUSG00000100991 Gm21856 predicted gene, 21856 -1.5850 1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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