Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1370532

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370532


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M11Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000105290 Gm43528 predicted gene 43528 5.4919 0.0000
2 ENSMUSG00000053678 Defb40 defensin beta 40 3.3219 0.0000
3 ENSMUSG00000022962 Gart phosphoribosylglycinamide formyltransferase 2.8074 0.0000
4 ENSMUSG00000002308 Cd320 CD320 antigen 2.5850 0.0001
5 ENSMUSG00000086020 Gm12239 predicted gene 12239 2.5850 0.0001
6 ENSMUSG00000104335 Gm38281 predicted gene, 38281 2.5850 0.0001
7 ENSMUSG00000084301 Gm7856 predicted gene 7856 2.3219 0.0000
8 ENSMUSG00000089589 Gm23343 predicted gene, 23343 2.3219 0.0006
9 ENSMUSG00000099741 Gm5253 predicted gene 5253 2.3219 0.0006
10 ENSMUSG00000107613 Gm43927 predicted gene, 43927 2.3219 0.0006

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000024068 Spast spastin -1.6060 0.0006
50599 ENSMUSG00000037214 Thap1 THAP domain containing, apoptosis associated protein 1 -1.6039 0.0000
50598 ENSMUSG00000088589 Gm22961 predicted gene, 22961 -1.6032 0.0000
50597 ENSMUSG00000034120 Srsf2 serine and arginine-rich splicing factor 2 -1.6016 0.0000
50596 ENSMUSG00000060961 Slc4a4 solute carrier family 4 (anion exchanger), member 4 -1.6015 0.0000
50595 ENSMUSG00000110856 Gm49264 predicted gene, 49264 -1.6008 0.0270
50594 ENSMUSG00000111908 Gm47516 predicted gene, 47516 -1.6000 0.0596
50593 ENSMUSG00000108572 Gm44883 predicted gene 44883 -1.6000 0.2324
50592 ENSMUSG00000102464 Gm38199 predicted gene, 38199 -1.6000 0.2324
50591 ENSMUSG00000101333 Gm4753 predicted gene 4753 -1.6000 0.2324

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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