Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1370541

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370541


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M19Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000105290 Gm43528 predicted gene 43528 5.7004 0.0000
2 ENSMUSG00000109354 Olfr706 olfactory receptor 706 4.5236 0.0000
3 ENSMUSG00000100580 4933436I20Rik RIKEN cDNA 4933436I20 gene 3.4594 0.0000
4 ENSMUSG00000111180 Gm39348 predicted gene, 39348 3.1699 0.0000
5 ENSMUSG00000103384 Gm37753 predicted gene, 37753 2.5850 0.0000
6 ENSMUSG00000103707 Pcdha6 protocadherin alpha 6 2.5850 0.0000
7 ENSMUSG00000083425 Gm13992 predicted gene 13992 2.3219 0.0075
8 ENSMUSG00000097754 Ptgs2os2 prostaglandin-endoperoxide synthase 2, opposite strand 2 2.3219 0.0075
9 ENSMUSG00000097927 Gm6999 predicted gene 6999 2.3219 0.0075
10 ENSMUSG00000106712 Gm19649 predicted gene, 19649 2.3219 0.0075

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000098883 Gm27430 predicted gene, 27430 -1.5850 1.0000
50599 ENSMUSG00000098208 Gm8349 predicted gene 8349 -1.5850 1.0000
50598 ENSMUSG00000098121 Gm27038 predicted gene, 27038 -1.5850 1.0000
50597 ENSMUSG00000097951 Gm7611 predicted gene 7611 -1.5850 0.3272
50595 ENSMUSG00000097537 2610020C07Rik RIKEN cDNA 2610020C07 gene -1.5850 1.0000
50594 ENSMUSG00000097443 Gm17529 predicted gene, 17529 -1.5850 1.0000
50592 ENSMUSG00000097111 Peak1os pseudopodium-enriched atypical kinase 1, opposite strand -1.5850 1.0000
50591 ENSMUSG00000096911 Gm2165 predicted gene 2165 -1.5850 1.0000
10 ENSMUSG00000106712 Gm19649 predicted gene, 19649 2.3219 0.0075
9 ENSMUSG00000097927 Gm6999 predicted gene 6999 2.3219 0.0075

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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