Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1370546

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370546


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M24Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000105290 Gm43528 predicted gene 43528 2.8122 0.0000
2 ENSMUSG00000109539 Gm44667 predicted gene 44667 2.8074 0.0008
3 ENSMUSG00000040132 Svs2 seminal vesicle secretory protein 2 2.3219 0.0089
4 ENSMUSG00000075137 Olfr1163 olfactory receptor 1163 2.3219 0.0089
5 ENSMUSG00000077971 Gm26259 predicted gene, 26259 2.3219 0.0089
6 ENSMUSG00000083094 Gm4908 predicted gene 4908 2.3219 0.0089
7 ENSMUSG00000083166 Gm8648 predicted gene 8648 2.3219 0.0089
8 ENSMUSG00000084479 Gm26424 predicted gene, 26424 2.3219 0.0089
9 ENSMUSG00000085757 Tslrn1 testis specific long noncoding RNA 1 2.3219 0.0001
10 ENSMUSG00000087815 Gm22491 predicted gene, 22491 2.3219 0.0089

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000110689 Gm45731 predicted gene 45731 -1.5850 0.0376
50599 ENSMUSG00000110257 Olfr529-ps1 olfactory receptor 529, pseudogene 1 -1.5850 0.3195
50598 ENSMUSG00000110246 C130073E24Rik RIKEN cDNA C130073E24 gene -1.5850 0.0000
50597 ENSMUSG00000110173 Gm6929 predicted gene 6929 -1.5850 0.3195
50596 ENSMUSG00000110066 Gm38430 predicted gene, 38430 -1.5850 1.0000
50595 ENSMUSG00000109985 Gm18640 predicted gene, 18640 -1.5850 1.0000
50594 ENSMUSG00000109980 Gm45538 predicted gene 45538 -1.5850 1.0000
50593 ENSMUSG00000109903 Gm28710 predicted gene 28710 -1.5850 1.0000
50592 ENSMUSG00000109801 Olfr1316 olfactory receptor 1316 -1.5850 1.0000
50591 ENSMUSG00000109797 Stambp-ps2 STAM binding protein, pseudogene 2 -1.5850 1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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