Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1370555

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370555


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M25Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000069390 Olfr707 olfactory receptor 707 5.0000 0.0000
2 ENSMUSG00000112452 Gm48075 predicted gene, 48075 3.4594 0.0034
3 ENSMUSG00000103465 Gm37617 predicted gene, 37617 3.0000 0.0209
4 ENSMUSG00000109354 Olfr706 olfactory receptor 706 3.0000 0.0000
5 ENSMUSG00000083238 Hspe1-ps4 heat shock protein 1 (chaperonin 10), pseudogene 4 2.8555 0.0000
6 ENSMUSG00000036938 Try5 trypsin 5 2.8074 0.0387
7 ENSMUSG00000082886 Gm5386 predicted pseudogene 5386 2.8074 0.0387
8 ENSMUSG00000101242 Gm28319 predicted gene 28319 2.8074 0.0387
9 ENSMUSG00000105290 Gm43528 predicted gene 43528 2.6326 0.0000
10 ENSMUSG00000044454 Olfr867 olfactory receptor 867 2.5850 0.0724

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000021415 4933417A18Rik RIKEN cDNA 4933417A18 gene -1.5850 0.1913
50599 ENSMUSG00000021414 Fam217a family with sequence similarity 217, member A -1.5850 0.1913
50598 ENSMUSG00000021408 Ripk1 receptor (TNFRSF)-interacting serine-threonine kinase 1 -1.5850 0.0000
50597 ENSMUSG00000019494 Cops6 COP9 signalosome subunit 6 -1.5850 0.0000
50596 ENSMUSG00000028341 Nr4a3 nuclear receptor subfamily 4, group A, member 3 -1.5833 0.0000
50595 ENSMUSG00000107997 Gm44243 predicted gene, 44243 -1.5830 0.0000
50594 ENSMUSG00000022679 Mpv17l Mpv17 transgene, kidney disease mutant-like -1.5805 0.0000
50593 ENSMUSG00000081023 Gm15766 predicted gene 15766 -1.5801 0.0000
50592 ENSMUSG00000103705 4930518J20Rik RIKEN cDNA 4930518J20 gene -1.5793 0.0000
50591 ENSMUSG00000032452 Clstn2 calsyntenin 2 -1.5781 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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