Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1370557

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370557


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M27Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000069390 Olfr707 olfactory receptor 707 4.7004 0.0000
2 ENSMUSG00000109354 Olfr706 olfactory receptor 706 4.7004 0.0000
3 ENSMUSG00000105523 Gm43193 predicted gene 43193 3.3907 0.0000
4 ENSMUSG00000089241 Gm24057 predicted gene, 24057 3.1699 0.0001
5 ENSMUSG00000106742 Gm42474 predicted gene 42474 2.8074 0.0009
6 ENSMUSG00000033096 Apmap adipocyte plasma membrane associated protein 2.6610 0.0000
7 ENSMUSG00000086407 Gm14123 predicted gene 14123 2.6610 0.0000
8 ENSMUSG00000015242 Nipsnap3a nipsnap homolog 3A 2.6474 0.0000
9 ENSMUSG00000072972 Adam4 a disintegrin and metallopeptidase domain 4 2.5850 0.0028
10 ENSMUSG00000082010 Olfr1171-ps1 olfactory receptor 1171, pseudogene 1 2.5850 0.0028

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000022120 Rnf219 ring finger protein 219 -1.8114 0.0000
50599 ENSMUSG00000039735 Fnbp1l formin binding protein 1-like -1.8100 0.0000
50598 ENSMUSG00000054667 Irs4 insulin receptor substrate 4 -1.8088 0.0000
50597 ENSMUSG00000048058 Ldlrad3 low density lipoprotein receptor class A domain containing 3 -1.8076 0.0000
50596 ENSMUSG00000077408 Gm25415 predicted gene, 25415 -1.8074 0.4194
50595 ENSMUSG00000102746 Gm37601 predicted gene, 37601 -1.8072 0.0225
50594 ENSMUSG00000061972 Olfr99 olfactory receptor 99 -1.8072 0.0225
50593 ENSMUSG00000103343 Gm37052 predicted gene, 37052 -1.8069 0.0000
50592 ENSMUSG00000085106 Gm16000 predicted gene 16000 -1.8065 0.0000
50591 ENSMUSG00000032285 Dnaja4 DnaJ heat shock protein family (Hsp40) member A4 -1.8057 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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