Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1370558

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370558


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M28Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000109539 Gm44667 predicted gene 44667 3.4594 0.0002
2 ENSMUSG00000020620 Abca8b ATP-binding cassette, sub-family A (ABC1), member 8b 2.6455 0.0000
3 ENSMUSG00000069390 Olfr707 olfactory receptor 707 2.6240 0.0000
4 ENSMUSG00000109354 Olfr706 olfactory receptor 706 2.6240 0.0000
5 ENSMUSG00000017688 Hnf4g hepatocyte nuclear factor 4, gamma 2.5850 0.0002
6 ENSMUSG00000082971 Gm13517 predicted gene 13517 2.5850 0.0152
7 ENSMUSG00000098114 Gm26957 predicted gene, 26957 2.5850 0.0152
8 ENSMUSG00000107957 Gm44088 predicted gene, 44088 2.5000 0.0002
9 ENSMUSG00000027209 Fam227b family with sequence similarity 227, member B 2.3219 0.0000
10 ENSMUSG00000029281 Smr2 submaxillary gland androgen regulated protein 2 2.3219 0.0352

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000104168 Gm38250 predicted gene, 38250 -1.4631 0.0000
50599 ENSMUSG00000104476 Gm38211 predicted gene, 38211 -1.4614 0.0976
50597 ENSMUSG00000101945 Gm29138 predicted gene 29138 -1.4609 0.0000
50596 ENSMUSG00000034731 Dgkh diacylglycerol kinase, eta -1.4601 0.0000
50595 ENSMUSG00000030814 Bcl7c B cell CLL/lymphoma 7C -1.4598 0.0000
50594 ENSMUSG00000027351 Spred1 sprouty protein with EVH-1 domain 1, related sequence -1.4586 0.0000
50593 ENSMUSG00000030870 Ubfd1 ubiquitin family domain containing 1 -1.4585 0.0000
50591 ENSMUSG00000020453 Patz1 POZ (BTB) and AT hook containing zinc finger 1 -1.4572 0.0000
10 ENSMUSG00000029281 Smr2 submaxillary gland androgen regulated protein 2 2.3219 0.0352
9 ENSMUSG00000027209 Fam227b family with sequence similarity 227, member B 2.3219 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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