Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1370566

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370566


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M36Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000069390 Olfr707 olfactory receptor 707 4.8074 0.0000
2 ENSMUSG00000109354 Olfr706 olfactory receptor 706 4.8074 0.0000
3 ENSMUSG00000109539 Gm44667 predicted gene 44667 4.6439 0.0000
4 ENSMUSG00000112452 Gm48075 predicted gene, 48075 4.6439 0.0000
5 ENSMUSG00000020191 Spata48 spermatogenesis associated 48 4.3923 0.0000
6 ENSMUSG00000072964 Bhlhb9 basic helix-loop-helix domain containing, class B9 4.1699 0.0000
7 ENSMUSG00000015405 Ace2 angiotensin I converting enzyme (peptidyl-dipeptidase A) 2 3.3219 0.0019
8 ENSMUSG00000098299 Mir7224 microRNA 7224 3.3219 0.0019
9 ENSMUSG00000102569 Gm37041 predicted gene, 37041 3.1699 0.0000
10 ENSMUSG00000055782 Abcd2 ATP-binding cassette, sub-family D (ALD), member 2 3.1427 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000073929 Trim30e-ps1 tripartite motif-containing 30E, pseudogene 1 -1.4037 0.0654
50599 ENSMUSG00000109156 Gm45194 predicted gene 45194 -1.4026 0.0000
50598 ENSMUSG00000102923 Gm31728 predicted gene, 31728 -1.3989 0.0000
50597 ENSMUSG00000080951 Gm12208 predicted gene 12208 -1.3966 0.0000
50596 ENSMUSG00000112794 Gm48878 predicted gene, 48878 -1.3948 0.0000
50595 ENSMUSG00000052656 Rnf103 ring finger protein 103 -1.3931 0.0000
50594 ENSMUSG00000051817 Sox12 SRY (sex determining region Y)-box 12 -1.3906 0.0000
50593 ENSMUSG00000103389 Gm37757 predicted gene, 37757 -1.3900 0.0703
50592 ENSMUSG00000100734 Rpl23a-ps8 ribosomal protein L23A, pseudogene 8 -1.3900 0.0625
50591 ENSMUSG00000058794 Nfe2 nuclear factor, erythroid derived 2 -1.3900 0.0625

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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