Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1370572

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370572


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M42Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000069390 Olfr707 olfactory receptor 707 5.9887 0.0000
2 ENSMUSG00000109539 Gm44667 predicted gene 44667 5.7549 0.0000
3 ENSMUSG00000047419 Cmya5 cardiomyopathy associated 5 4.5850 0.0000
4 ENSMUSG00000102569 Gm37041 predicted gene, 37041 4.0875 0.0000
5 ENSMUSG00000109354 Olfr706 olfactory receptor 706 3.7868 0.0000
6 ENSMUSG00000075137 Olfr1163 olfactory receptor 1163 3.5850 0.0003
7 ENSMUSG00000089678 Agxt2 alanine-glyoxylate aminotransferase 2 3.5850 0.0003
8 ENSMUSG00000103465 Gm37617 predicted gene, 37617 3.3219 0.0014
9 ENSMUSG00000110158 Gm45690 predicted gene 45690 3.3219 0.0014
10 ENSMUSG00000082886 Gm5386 predicted pseudogene 5386 3.1699 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000096800 Gm4725 predicted gene 4725 -1.2925 0.2508
50599 ENSMUSG00000094786 Gm14403 predicted gene 14403 -1.2925 0.2508
50598 ENSMUSG00000094248 Hist1h2ao histone cluster 1, H2ao -1.2925 0.2508
50597 ENSMUSG00000090186 Gm7592 predicted gene 7592 -1.2925 0.0318
50596 ENSMUSG00000087170 1700001G01Rik RIKEN cDNA 1700001G01 gene -1.2925 0.2508
50595 ENSMUSG00000084718 n-R5s187 nuclear encoded rRNA 5S 187 -1.2925 0.2508
50594 ENSMUSG00000084518 Gm22477 predicted gene, 22477 -1.2925 0.2508
50593 ENSMUSG00000071764 Olfr1320 olfactory receptor 1320 -1.2925 0.2508
50592 ENSMUSG00000069307 Hist1h2bq histone cluster 1, H2bq -1.2925 0.2508
50591 ENSMUSG00000021238 Aldh6a1 aldehyde dehydrogenase family 6, subfamily A1 -1.2925 0.2508

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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