Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1900064-2

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1900064-2


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7020001000000000000000-715Sequence Read ArchiveSRP052901SRP052901_M16Single Cell triple omics sequencing reveals genetic and epigenetic heterogeneity in hepatocellular carcinomaMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
2 ENSMUSG00000103685 Gm37074 predicted gene, 37074 7.0334 0.0000
3 ENSMUSG00000090657 Gm8114 predicted gene 8114 6.9307 0.0000
4 ENSMUSG00000021460 Auh AU RNA binding protein/enoyl-coenzyme A hydratase 6.7459 0.0000
5 ENSMUSG00000107907 Gm8574 predicted gene 8574 6.6629 0.0000
6 ENSMUSG00000064522 Gm26442 predicted gene, 26442 6.6534 0.0000
7 ENSMUSG00000104189 Gm37822 predicted gene, 37822 6.6534 0.0000
8 ENSMUSG00000041477 Dcp1b decapping mRNA 1B 6.6510 0.0000
9 ENSMUSG00000059159 Gm8129 predicted pseudogene 8129 6.6439 0.0000
10 ENSMUSG00000111704 Gm47379 predicted gene, 47379 6.6294 0.0000
50591 ENSMUSG00000020290 Xpo1 exportin 1 -5.9276 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000085742 Gm13536 predicted gene 13536 -5.9371 0.0000
50599 ENSMUSG00000030987 Stim1 stromal interaction molecule 1 -5.9319 0.0000
50598 ENSMUSG00000098656 Mir7028 microRNA 7028 -5.9307 0.0000
50597 ENSMUSG00000094247 Gm23968 predicted gene, 23968 -5.9307 0.0000
50596 ENSMUSG00000052396 Mogat2 monoacylglycerol O-acyltransferase 2 -5.9307 0.0000
50595 ENSMUSG00000038612 Mcl1 myeloid cell leukemia sequence 1 -5.9307 0.0000
50594 ENSMUSG00000029205 Chrna9 cholinergic receptor, nicotinic, alpha polypeptide 9 -5.9301 0.0000
50593 ENSMUSG00000043991 Pura purine rich element binding protein A -5.9280 0.0000
50592 ENSMUSG00000051062 Fbll1 fibrillarin-like 1 -5.9277 0.0000
50591 ENSMUSG00000020290 Xpo1 exportin 1 -5.9276 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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