Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2026502

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026502


Profile download
3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M10Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000110239 Gm45620 predicted gene 45620 9.1876 0.0000
2 ENSMUSG00000099764 Rps10-ps2 ribosomal protein S10, pseudogene 2 9.0875 0.0000
3 ENSMUSG00000102082 Gm28675 predicted gene 28675 8.8156 0.0000
4 ENSMUSG00000101102 Gm28609 predicted gene 28609 8.8089 0.0000
5 ENSMUSG00000077591 Gm26016 predicted gene, 26016 8.7266 0.0000
6 ENSMUSG00000056824 Zfp663 zinc finger protein 663 8.6882 0.0000
7 ENSMUSG00000076430 Hus1b HUS1 checkpoint clamp component B 8.6049 0.0000
8 ENSMUSG00000106739 Gm43499 predicted gene 43499 8.4769 0.0000
9 ENSMUSG00000039934 Gsap gamma-secretase activating protein 8.3685 0.0000
10 ENSMUSG00000085049 Parvaos parvin, alpha, opposite strand 8.3405 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000003934 Efnb3 ephrin B3 -5.6250 0.0000
50599 ENSMUSG00000037514 Pank2 pantothenate kinase 2 -5.6241 0.0000
50598 ENSMUSG00000030022 Adamts9 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 9 -5.6238 0.0000
50597 ENSMUSG00000031458 Coprs coordinator of PRMT5, differentiation stimulator -5.6208 0.0000
50596 ENSMUSG00000091177 Gm15494 predicted gene 15494 -5.6199 0.0000
50595 ENSMUSG00000089129 Gm26407 predicted gene, 26407 -5.6199 0.0000
50594 ENSMUSG00000006154 Eps8l1 EPS8-like 1 -5.6199 0.0000
50593 ENSMUSG00000081745 Gm15549 predicted gene 15549 -5.6193 0.0000
50592 ENSMUSG00000024640 Psat1 phosphoserine aminotransferase 1 -5.6186 0.0000
50591 ENSMUSG00000028747 Htr6 5-hydroxytryptamine (serotonin) receptor 6 -5.6183 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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