Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2026503

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026503


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3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M11Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000110508 Gm8940 predicted gene 8940 8.5736 0.0000
2 ENSMUSG00000025380 Fscn2 fascin actin-bundling protein 2 8.1280 0.0000
3 ENSMUSG00000110662 Gm45722 predicted gene 45722 8.0768 0.0000
4 ENSMUSG00000105518 Gm42674 predicted gene 42674 8.0661 0.0000
5 ENSMUSG00000101729 Gm17796 predicted gene, 17796 8.0444 0.0000
6 ENSMUSG00000000730 Dnmt3l DNA (cytosine-5-)-methyltransferase 3-like 7.9944 0.0000
7 ENSMUSG00000030737 Slco2b1 solute carrier organic anion transporter family, member 2b1 7.9008 0.0000
8 ENSMUSG00000109559 Gm34280 predicted gene, 34280 7.9008 0.0000
9 ENSMUSG00000050276 Mrgprg MAS-related GPR, member G 7.8611 0.0000
10 ENSMUSG00000001020 S100a4 S100 calcium binding protein A4 7.8147 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000041153 Osgin2 oxidative stress induced growth inhibitor family member 2 -5.9475 0.2044
50599 ENSMUSG00000030035 Wbp1 WW domain binding protein 1 -5.9473 0.0000
50598 ENSMUSG00000104168 Gm38250 predicted gene, 38250 -5.9392 0.0000
50597 ENSMUSG00000022519 Srl sarcalumenin -5.9373 0.0000
50596 ENSMUSG00000027479 Mapre1 microtubule-associated protein, RP/EB family, member 1 -5.9350 0.0000
50595 ENSMUSG00000070972 Dnajc25 DnaJ heat shock protein family (Hsp40) member C25 -5.9327 0.0000
50594 ENSMUSG00000024502 Jakmip2 janus kinase and microtubule interacting protein 2 -5.9307 0.0000
50593 ENSMUSG00000024197 Plin3 perilipin 3 -5.9307 0.0000
50592 ENSMUSG00000042202 Slc35e2 solute carrier family 35, member E2 -5.9261 0.0000
50591 ENSMUSG00000020458 Rtn4 reticulon 4 -5.9172 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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