Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2026505

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026505


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3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M13Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000065426 Mir134 microRNA 134 10.0091 0.0000
2 ENSMUSG00000065428 Mir382 microRNA 382 10.0091 0.0000
3 ENSMUSG00000065448 Mir154 microRNA 154 10.0091 0.0000
4 ENSMUSG00000070128 Mir485 microRNA 485 10.0091 0.0000
5 ENSMUSG00000070136 Mir496a microRNA 496a 10.0091 0.0000
6 ENSMUSG00000077925 Mir453 microRNA 453 10.0091 0.0000
7 ENSMUSG00000099236 Mir668 microRNA 668 10.0091 0.0000
8 ENSMUSG00000089530 Gm25163 predicted gene, 25163 9.6312 0.0000
9 ENSMUSG00000081341 Gm14891 predicted gene 14891 9.3032 0.0000
10 ENSMUSG00000026930 Gpsm1 G-protein signalling modulator 1 (AGS3-like, C. elegans) 9.2071 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000087563 Gm14205 predicted gene 14205 -7.3742 0.0000
50599 ENSMUSG00000097232 Gm26854 predicted gene, 26854 -7.3707 0.0000
50598 ENSMUSG00000083485 Gm12308 predicted gene 12308 -7.3705 0.0000
50597 ENSMUSG00000083300 Gm12309 predicted gene 12309 -7.3705 0.0000
50596 ENSMUSG00000069835 Sat2 spermidine/spermine N1-acetyl transferase 2 -7.3705 0.0000
50595 ENSMUSG00000085763 Smc2os structural maintenance of chromosomes 2, opposite strand -7.3695 0.0000
50594 ENSMUSG00000075265 Tnk2os tyrosine kinase, non-receptor 2, opposite strand -7.3650 0.0000
50593 ENSMUSG00000097690 4930505N22Rik RIKEN cDNA 4930505N22 gene -7.3633 0.0000
50592 ENSMUSG00000039438 Ttc36 tetratricopeptide repeat domain 36 -7.3605 0.0000
50591 ENSMUSG00000065258 Gm23969 predicted gene, 23969 -7.3587 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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