Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2026506

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026506


Profile download
3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M14Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000084574 n-R5s198 nuclear encoded rRNA 5S 198 7.9248 0.0000
2 ENSMUSG00000087647 Gm15407 predicted gene 15407 7.6795 0.0000
3 ENSMUSG00000029204 Rhoh ras homolog family member H 7.6724 0.0000
4 ENSMUSG00000106681 Gm43004 predicted gene 43004 7.6724 0.0000
5 ENSMUSG00000106776 Gm42646 predicted gene 42646 7.6724 0.0000
6 ENSMUSG00000048981 Krt31 keratin 31 7.6511 0.0000
7 ENSMUSG00000087581 Gm11571 predicted gene 11571 7.6511 0.0000
8 ENSMUSG00000024440 Pcdh12 protocadherin 12 7.5392 0.0000
9 ENSMUSG00000089530 Gm25163 predicted gene, 25163 7.4724 0.0000
10 ENSMUSG00000020383 Il13 interleukin 13 7.3765 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000086914 Gm16124 predicted gene 16124 -6.2446 0.0000
50599 ENSMUSG00000025939 Ube2w ubiquitin-conjugating enzyme E2W (putative) -6.2445 0.0000
50598 ENSMUSG00000057230 Aak1 AP2 associated kinase 1 -6.2441 0.0000
50597 ENSMUSG00000098319 Mir7038 microRNA 7038 -6.2416 0.0000
50596 ENSMUSG00000056076 Eif3b eukaryotic translation initiation factor 3, subunit B -6.2416 0.0000
50595 ENSMUSG00000010392 Gosr1 golgi SNAP receptor complex member 1 -6.2384 0.0007
50594 ENSMUSG00000006235 Epor erythropoietin receptor -6.2371 0.0000
50593 ENSMUSG00000073158 9030624G23Rik RIKEN cDNA 9030624G23 gene -6.2369 0.0000
50592 ENSMUSG00000019861 Gopc golgi associated PDZ and coiled-coil motif containing -6.2363 0.0000
50591 ENSMUSG00000034875 Nudt19 nudix (nucleoside diphosphate linked moiety X)-type motif 19 -6.2341 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...