Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2026507

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026507


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3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M15Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000081465 Gm12884 predicted gene 12884 6.7549 0.0000
2 ENSMUSG00000083901 Gm12885 predicted gene 12885 6.7549 0.0000
3 ENSMUSG00000083941 Gm12889 predicted gene 12889 6.7549 0.0000
4 ENSMUSG00000020609 Apob apolipoprotein B 5.9069 0.0000
5 ENSMUSG00000020098 Pcbd1 pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 1 5.8826 0.0000
6 ENSMUSG00000093406 Rpl48-ps1 ribosomal protein L48, pseudogene 1 5.5850 0.0000
7 ENSMUSG00000082170 Gm8617 predicted gene 8617 5.5546 0.0000
8 ENSMUSG00000082281 Gm4886 predicted gene 4886 5.5546 0.0000
9 ENSMUSG00000100837 1700063D05Rik RIKEN cDNA 1700063D05 gene 5.4263 0.0000
10 ENSMUSG00000029414 Kntc1 kinetochore associated 1 5.2854 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000089739 Gm20431 predicted gene 20431 -4.0639 0.0000
50599 ENSMUSG00000047454 Gphn gephyrin -4.0637 0.0000
50598 ENSMUSG00000052819 Best2 bestrophin 2 -4.0602 0.0176
50597 ENSMUSG00000042303 Sgsm3 small G protein signaling modulator 3 -4.0560 0.0000
50596 ENSMUSG00000044221 Grsf1 G-rich RNA sequence binding factor 1 -4.0496 0.0000
50595 ENSMUSG00000040434 Large2 LARGE xylosyl- and glucuronyltransferase 2 -4.0479 0.0000
50594 ENSMUSG00000057134 Ado 2-aminoethanethiol (cysteamine) dioxygenase -4.0475 0.0000
50593 ENSMUSG00000080878 Gm15618 predicted gene 15618 -4.0451 0.0000
50592 ENSMUSG00000029916 Agk acylglycerol kinase -4.0439 0.0000
50591 ENSMUSG00000065571 Mir326 microRNA 326 -4.0437 0.1120

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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