Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2773548

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773548


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7010000000000000000000-773Sequence Read ArchiveSRP074598SRP074598_M175Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeMorulaHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000243861 novel transcript 2.6962 0.0000
2 ENSG00000229082 OR5AW1P olfactory receptor family 5 subfamily AW member 1 pseudogene 2.5850 0.0003
3 ENSG00000279485 TEC 2.4130 0.0000
4 ENSG00000067646 ZFY zinc finger protein Y-linked 2.3219 0.0014
5 ENSG00000201744 RNU6-34P RNA, U6 small nuclear 34, pseudogene 2.3219 0.0014
6 ENSG00000212434 Small nucleolar RNA U3 2.3219 0.0014
7 ENSG00000221996 OR52B4 olfactory receptor family 52 subfamily B member 4 2.3219 0.0014
8 ENSG00000229163 NAP1L1P2 nucleosome assembly protein 1 like 1 pseudogene 2 2.3219 0.0014
9 ENSG00000278847 novel transcript 2.3219 0.0014
10 ENSG00000253327 RAD21-AS1 RAD21 antisense RNA 1 2.1610 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63173 ENSG00000268047 novel transcript, antisense to PTOV1 -1.8692 0.0000
63172 ENSG00000225258 novel transcript -1.8691 0.0000
63171 ENSG00000182518 FAM104B family with sequence similarity 104 member B -1.8690 0.0000
63170 ENSG00000198860 TSEN15 tRNA splicing endonuclease subunit 15 -1.8689 0.0000
63169 ENSG00000136297 MMD2 monocyte to macrophage differentiation associated 2 -1.8688 0.0000
63168 ENSG00000277311 NA -1.8687 0.0000
63167 ENSG00000235601 BARX1-DT BARX1 divergent transcript -1.8686 0.0000
63166 ENSG00000238113 LINC01410 long intergenic non-protein coding RNA 1410 -1.8683 0.0000
63165 ENSG00000174749 FAM241A family with sequence similarity 241 member A -1.8682 0.0000
63164 ENSG00000250538 novel transcript -1.8680 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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