Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2773555

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773555


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7010000000000000000000-773Sequence Read ArchiveSRP074598SRP074598_M182Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeMorulaHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000226254 PTP4A1P3 PTP4A1 pseudogene 3 3.0000 0.0000
2 ENSG00000255548 novel transcript 2.8074 0.0000
3 ENSG00000218187 transducin (beta)-like 1 X-linked receptor 1 (TBL1XR1) pseudogene 2.6962 0.0000
4 ENSG00000182000 PPIAP73 peptidylprolyl isomerase A pseudogene 73 2.5850 0.0000
5 ENSG00000228217 PNRC2P1 proline rich nuclear receptor coactivator 2 pseudogene 1 2.5850 0.0000
6 ENSG00000230081 HSPE1P28 heat shock protein family E (Hsp10) member 1 pseudogene 28 2.5850 0.0001
7 ENSG00000251838 NA 2.5850 0.0001
8 ENSG00000252115 Y RNA 2.5850 0.0000
9 ENSG00000267585 ribosomal protein L10a (RPL10A) pseudogene 2.5499 0.0000
10 ENSG00000225369 CAPZA1P2 CAPZA1 pseudogene 2 2.5265 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63173 ENSG00000284029 MIR6805 microRNA 6805 -2.3259 0.0000
63172 ENSG00000255293 WIZP1 WIZ pseudogene 1 -2.3259 0.0000
63171 ENSG00000180447 GAS1 growth arrest specific 1 -2.3255 0.0000
63170 ENSG00000272259 LINC01749 long intergenic non-protein coding RNA 1749 -2.3251 0.0000
63169 ENSG00000207405 SNORA64 small nucleolar RNA, H/ACA box 64 -2.3238 0.0000
63168 ENSG00000230513 THAP7-AS1 THAP7 antisense RNA 1 -2.3225 0.0000
63167 ENSG00000168491 CCDC110 coiled-coil domain containing 110 -2.3223 0.0000
63166 ENSG00000236028 novel transcript -2.3223 0.0000
63165 ENSG00000275628 uncharacterized LOC107987066 -2.3219 0.0043
10 ENSG00000225369 CAPZA1P2 CAPZA1 pseudogene 2 2.5265 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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