Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
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SHOGoiN Cell Methylome
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Project Id
Project
Assay
Source Cell
Technology
Data
Project Title
Organization Name
Assay Type
Source Cell Type
Source Organism
Assay Technology
Data Type
1
SRP016010
Single-cell DNA methylation analysis of epimutations in mouse liver cells.
Max Planck Institute Cologne
Methylome
Hepatocyte
Mouse
Bisulfite-Seq (RRBS)
Sequence
2
SRP023116
Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencing
Biodynamics Optical Imaging Center, Peking University
Methylome
Embryonic stem cell
Mouse
Bisulfite-Seq (RRBS)
Sequence
3
SRP041257
Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic Heterogeneity
The Babraham Institute
Methylome
Secondary oocyte (Ovarian follicle)
Mouse
Bisulfite-Seq (WGBS)
Sequence
4
SRP052901
Single Cell triple omics sequencing reveals genetic and epigenetic heterogeneity in hepatocellular carcinoma
Peking University
Methylome
Embryonic stem cell
Mouse
Bisulfite-Seq (RRBS), Trio-seq
Sequence
5
SRP062328
Human oocyte DNA methylome
Albert Einstein College of Medicine
Methylome
Oocyte (mature metaphase (MI) stage )
Human
Bisulfite-Seq (WGBS)
Sequence
6
SRP068012
Simultaneous profiling of transcriptome and DNA methylome from a single cell
UCLA
Methylome
Neuron (Dorsal root ganglion)
Mouse
Bisulfite-Seq (RRBS)
Sequence
7
SRP070637
Single-cell multi-omics sequencing of mouse early embryos and embryonic stem cells
Southern Medical University
Methylome
Oocyte
Mouse
Bisulfite-Seq (WGBS) (PBAT)
Sequence
8
SRP074598
Single-cell DNA methylome sequencing of human preimplantation embryos
MGH cancer center
Methylome
Metaphase II oocyte
Human
Bisulfite-Seq (PBAT)
Sequence
9
SRP093251
Derivation and functional annotation of hematopoietic subpopulations from single-cell DNA methylation data
University of British Columbia
Methylome
Hematopoetic Stem Cell
Mouse
Bisulfite-Seq (WGBS) (PBAL)
Sequence
10
SRP109843
Single-cell multi-omics sequencing of human early embryos
Southern Medical University
Methylome
Oocyte
Human
Bisulfite-Seq (WGBS)
Sequence
