Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1160112

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


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5030206000000000000000-761Sequence Read ArchiveSRP018525SRP018525_T16Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptomeSecondary oocyteHumanGenitaliaRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000164611 PTTG1 PTTG1 regulator of sister chromatid separation, securin 94.9722
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 82.4911
3 ENSG00000187569 DPPA3 developmental pluripotency associated 3 77.4514
4 ENSG00000132646 PCNA proliferating cell nuclear antigen 76.7594
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 75.9387
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 50.0567
7 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 46.7487
8 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 37.3513
9 ENSG00000261812 TUBB8P7 tubulin beta 8 class VIII pseudogene 7 36.4206
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 35.7746

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0527
58502 ENSG00000285733 novel protein -0.0527
58501 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0527
58500 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0527
58499 ENSG00000285730 novel transcript -0.0527
58498 ENSG00000285729 novel transcript -0.0527
58497 ENSG00000285727 novel transcript -0.0527
58496 ENSG00000285726 novel transcript -0.0527
58495 ENSG00000285725 novel transcript -0.0527
58494 ENSG00000285724 novel transcript -0.0527

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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