Human Omics database for
the Generation of iPS and Normal Cells
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Statistics
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All Modules
Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1268970
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1268970
Profile download
6000003010000000000000-738
Sequence Read Archive
SRP033135
SRP033135_T10
Pseudo-temporal ordering of individual cells reveals regulators of differentiation
Transcriptome
Myoblast_T0 (Skeletal muscle)
Human
Muscle
RNA-seq
HiSeq 2500
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000210082
MT-RNR2
mitochondrially encoded 16S rRNA
108.1129
2
ENSG00000182718
ANXA2
annexin A2
99.9081
3
ENSG00000075624
ACTB
actin beta
58.2225
4
ENSG00000198804
MT-CO1
mitochondrially encoded cytochrome c oxidase I
56.7490
5
ENSG00000131711
MAP1B
microtubule associated protein 1B
56.1193
6
ENSG00000111640
GAPDH
glyceraldehyde-3-phosphate dehydrogenase
46.0351
7
ENSG00000118971
CCND2
cyclin D2
42.8037
8
ENSG00000198712
MT-CO2
mitochondrially encoded cytochrome c oxidase II
33.7439
9
ENSG00000184009
ACTG1
actin gamma 1
33.3236
10
ENSG00000181163
NPM1
nucleophosmin 1
26.1400
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285747
novel transcript
-0.0565
58502
ENSG00000285746
putative UPF0607 protein ENSP00000383144
-0.0565
58501
ENSG00000285745
general transcription factor IIH subunit 5 (GTF2H5) pseudogene
-0.0565
58500
ENSG00000285744
novel transcript
-0.0565
58499
ENSG00000285743
novel transcript, LINP1-LINC00707 readthrough
-0.0565
58498
ENSG00000285742
novel transcript
-0.0565
58497
ENSG00000285741
novel transcript
-0.0565
58496
ENSG00000285740
novel transcript
-0.0565
58495
ENSG00000285739
novel transcript, antisense to NRG3
-0.0565
58494
ENSG00000285738
Novel transcript
-0.0565
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
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