Human Omics database for
the Generation of iPS and Normal Cells
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All Modules
Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1269007
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1269007
Profile download
6000003010000000000000-738
Sequence Read Archive
SRP033135
SRP033135_T42
Pseudo-temporal ordering of individual cells reveals regulators of differentiation
Transcriptome
Myoblast_T0 (Skeletal muscle)
Human
Muscle
RNA-seq
HiSeq 2500
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000167601
AXL
AXL receptor tyrosine kinase
85.0724
2
ENSG00000182718
ANXA2
annexin A2
71.5137
3
ENSG00000210082
MT-RNR2
mitochondrially encoded 16S rRNA
70.1436
4
ENSG00000198804
MT-CO1
mitochondrially encoded cytochrome c oxidase I
59.0255
5
ENSG00000106366
SERPINE1
serpin family E member 1
57.9194
6
ENSG00000075624
ACTB
actin beta
51.3969
7
ENSG00000111640
GAPDH
glyceraldehyde-3-phosphate dehydrogenase
43.6899
8
ENSG00000198712
MT-CO2
mitochondrially encoded cytochrome c oxidase II
40.0861
9
ENSG00000184009
ACTG1
actin gamma 1
38.8159
10
ENSG00000123416
TUBA1B
tubulin alpha 1b
38.1593
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285736
Novel transcript
-0.0976
58502
ENSG00000285735
LINC02717
long intergenic non-protein coding RNA 2717
-0.0976
58501
ENSG00000285734
novel transcript, antisense to CACNA1C
-0.0976
58500
ENSG00000285733
novel protein
-0.0976
58499
ENSG00000285732
novel transcript, antisense to ABCD2
-0.0976
58498
ENSG00000285731
Novel transcript, antisense to TBC1D5
-0.0976
58497
ENSG00000285729
novel transcript
-0.0976
58496
ENSG00000285727
novel transcript
-0.0976
58495
ENSG00000285726
novel transcript
-0.0976
58494
ENSG00000285725
novel transcript
-0.0976
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
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