Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269017

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T51Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 140.3295
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 124.9812
3 ENSG00000182718 ANXA2 annexin A2 84.4810
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 39.4386
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 36.2818
6 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 34.0563
7 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 31.4462
8 ENSG00000115414 FN1 fibronectin 1 29.5637
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 26.9536
10 ENSG00000125148 MT2A metallothionein 2A 26.7111

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285742 novel transcript -0.0406
58502 ENSG00000285741 novel transcript -0.0406
58501 ENSG00000285740 novel transcript -0.0406
58500 ENSG00000285739 novel transcript, antisense to NRG3 -0.0406
58499 ENSG00000285738 Novel transcript -0.0406
58498 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0406
58497 ENSG00000285736 Novel transcript -0.0406
58496 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0406
58495 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0406
58494 ENSG00000285733 novel protein -0.0406

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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