Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269053

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T82Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T0 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000177954 RPS27 ribosomal protein S27 65.5291
2 ENSG00000100316 RPL3 ribosomal protein L3 49.1354
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 49.1354
4 ENSG00000269968 novel transcript, antisense to GAPDH 49.1354
5 ENSG00000041357 PSMA4 proteasome 20S subunit alpha 4 32.7418
6 ENSG00000071082 RPL31 ribosomal protein L31 32.7418
7 ENSG00000084207 GSTP1 glutathione S-transferase pi 1 32.7418
8 ENSG00000110955 ATP5F1B ATP synthase F1 subunit beta 32.7418
9 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 32.7418
10 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 32.7418

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285747 novel transcript -0.0455
58502 ENSG00000285746 putative UPF0607 protein ENSP00000383144 -0.0455
58501 ENSG00000285745 general transcription factor IIH subunit 5 (GTF2H5) pseudogene -0.0455
58500 ENSG00000285744 novel transcript -0.0455
58499 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0455
58498 ENSG00000285742 novel transcript -0.0455
58497 ENSG00000285741 novel transcript -0.0455
58496 ENSG00000285740 novel transcript -0.0455
58495 ENSG00000285739 novel transcript, antisense to NRG3 -0.0455
58494 ENSG00000285738 Novel transcript -0.0455

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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