Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269074

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269074


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T97Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 188.6423
2 ENSG00000075624 ACTB actin beta 44.8332
3 ENSG00000167552 TUBA1A tubulin alpha 1a 38.5052
4 ENSG00000124491 F13A1 coagulation factor XIII A chain 33.8548
5 ENSG00000109971 HSPA8 heat shock protein family A (Hsp70) member 8 32.0965
6 ENSG00000182718 ANXA2 annexin A2 27.3560
7 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 25.4237
8 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 22.9727
9 ENSG00000172403 SYNPO2 synaptopodin 2 22.8329
10 ENSG00000198668 CALM1 calmodulin 1 21.7891

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285740 novel transcript -0.0744
58502 ENSG00000285739 novel transcript, antisense to NRG3 -0.0744
58501 ENSG00000285738 Novel transcript -0.0744
58500 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0744
58499 ENSG00000285736 Novel transcript -0.0744
58498 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0744
58497 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0744
58496 ENSG00000285733 novel protein -0.0744
58495 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0744
58494 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0744

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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