Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269086

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269086


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T105Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 112.7908
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 107.3371
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 96.4296
4 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 77.5598
5 ENSG00000087086 FTL ferritin light chain 41.2157
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 38.3133
7 ENSG00000115414 FN1 fibronectin 1 36.8151
8 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 35.7534
9 ENSG00000182718 ANXA2 annexin A2 29.0925
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 26.1387

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285738 Novel transcript -0.0769
58502 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0769
58501 ENSG00000285736 Novel transcript -0.0769
58500 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0769
58499 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0769
58498 ENSG00000285733 novel protein -0.0769
58497 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0769
58496 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0769
58495 ENSG00000285729 novel transcript -0.0769
58494 ENSG00000285727 novel transcript -0.0769

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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