Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1269113
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1269113
Profile download
6000003010000000000000-738
Sequence Read Archive
SRP033135
SRP033135_T128
Pseudo-temporal ordering of individual cells reveals regulators of differentiation
Transcriptome
Myoblast_T24 (Skeletal muscle)
Human
Muscle
RNA-seq
HiSeq 2500
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000119718
EIF2B2
eukaryotic translation initiation factor 2B subunit beta
163.9111
2
ENSG00000106591
MRPL32
mitochondrial ribosomal protein L32
115.1784
3
ENSG00000138600
SPPL2A
signal peptide peptidase like 2A
69.6604
4
ENSG00000135390
ATP5MC2
ATP synthase membrane subunit c locus 2
57.9199
5
ENSG00000142089
IFITM3
interferon induced transmembrane protein 3
54.1228
6
ENSG00000101608
MYL12A
myosin light chain 12A
41.9862
7
ENSG00000258646
novel transcript, antisense to EIF2B2
40.9613
8
ENSG00000112308
C6orf62
chromosome 6 open reading frame 62
34.8114
9
ENSG00000085063
CD59
CD59 molecule (CD59 blood group)
26.4486
10
ENSG00000112081
SRSF3
serine and arginine rich splicing factor 3
23.7231
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285745
general transcription factor IIH subunit 5 (GTF2H5) pseudogene
-0.0143
58502
ENSG00000285744
novel transcript
-0.0143
58501
ENSG00000285743
novel transcript, LINP1-LINC00707 readthrough
-0.0143
58500
ENSG00000285742
novel transcript
-0.0143
58499
ENSG00000285741
novel transcript
-0.0143
58498
ENSG00000285740
novel transcript
-0.0143
58497
ENSG00000285739
novel transcript, antisense to NRG3
-0.0143
58496
ENSG00000285738
Novel transcript
-0.0143
58495
ENSG00000285737
LINC02680
long intergenic non-protein coding RNA 2680
-0.0143
58494
ENSG00000285736
Novel transcript
-0.0143
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
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