Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269160

Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1269160 Profile download	6000003010000000000000-738	Sequence Read Archive	SRP033135	SRP033135_T168	Pseudo-temporal ordering of individual cells reveals regulators of differentiation	Transcriptome	Myoblast_T48 (Skeletal muscle)	Human	Muscle	RNA-seq	HiSeq 2500	Sequence

Histogram (Expression count)

Top 10 up-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
1	ENSG00000210082	MT-RNR2	mitochondrially encoded 16S rRNA	136.4808
2	ENSG00000198804	MT-CO1	mitochondrially encoded cytochrome c oxidase I	109.8164
3	ENSG00000198712	MT-CO2	mitochondrially encoded cytochrome c oxidase II	77.7963
4	ENSG00000159251	ACTC1	actin alpha cardiac muscle 1	51.5921
5	ENSG00000198886	MT-ND4	mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4	50.6836
6	ENSG00000251562	MALAT1	metastasis associated lung adenocarcinoma transcript 1	45.0291
7	ENSG00000198727	MT-CYB	mitochondrially encoded cytochrome b	44.2581
8	ENSG00000198938	MT-CO3	mitochondrially encoded cytochrome c oxidase III	36.9479
9	ENSG00000156508	EEF1A1	eukaryotic translation elongation factor 1 alpha 1	30.2773
10	ENSG00000198899	MT-ATP6	mitochondrially encoded ATP synthase membrane subunit 6	30.2474

Bottom 10 down-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
58503	ENSG00000285740		novel transcript	-0.0631
58502	ENSG00000285739		novel transcript, antisense to NRG3	-0.0631
58501	ENSG00000285738		Novel transcript	-0.0631
58500	ENSG00000285737	LINC02680	long intergenic non-protein coding RNA 2680	-0.0631
58499	ENSG00000285736		Novel transcript	-0.0631
58498	ENSG00000285735	LINC02717	long intergenic non-protein coding RNA 2717	-0.0631
58497	ENSG00000285734		novel transcript, antisense to CACNA1C	-0.0631
58496	ENSG00000285733		novel protein	-0.0631
58495	ENSG00000285732		novel transcript, antisense to ABCD2	-0.0631
58494	ENSG00000285731		Novel transcript, antisense to TBC1D5	-0.0631

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	Z-score

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